ICTV Report

Subfamily: Deltarhabdovirinae

Genus: Gammaricinrhavirus

 

Distinguishing features

Viruses assigned to the genus Gammaricinrhavirus form a distinct monophyletic group based on well-supported Maximum Likelihood or Maximum Clade Credibility trees inferred from complete L sequences. Members of the genus have been detected in hard ticks (family Ixodidae). They are distinct phylogenetically from viruses assigned to the genera Alpharicinrhavirus and Betaricinrhavirus.

Virion

Morphology

Virion morphology is unknown.

Nucleic acid

The genomes consist of a single molecule of negative-sense, single-stranded RNA of approximately 13.4–13.7 kb (Li et al., 2015, Kong et al., 2022).

Proteins

The N, P, M, G and L proteins share sequence homology and/or structural characteristics with the cognate proteins of other rhabdoviruses.

Genome organisation and replication

The genomes include the five canonical rhabdovirus structural protein genes (N, P, M, G and L) and one additional gene (U1) between the M and G genes encoding a protein of approximately 35 kDa (Figure 1 Gammaricinrhavirus).

Gammaricinvirus genomes
Figure 1 Gammaricinrhavirus. Schematic representation of the gammahymrhavirus genomes shown in reverse (positive-sense) polarity. The genomes contain long open reading frames (ORFs) in the N, P, M, G and L genes (open arrows) and an additional ORFs between M and G (orange)

Biology

The viruses assigned to this genus were discovered by viral metagenomic sequencing of hard ticks (Ixodidae) from China. Fuyun tick rhabdovirus (species Gammaricinrhavirus fuyun) was detected in Hyalomma sp. ticks collected in Fuyun, Xinjiang Province (Kong et al., 2022). Tacheng tick virus 7 (species Gammaricinrhavirus tacheng) was detected in Argas miniatus ticks collected in Tacheng, Xinjiang Province (Li et al., 2015). No isolates of the viruses have yet been reported.

Species demarcation criteria

Viruses assigned to different species within the genus have several of the following characteristics: A) minimum amino acid sequence divergence of 10% in the N proteins; B) minimum amino acid sequence divergence of 10% in the L proteins; C) minimum amino acid sequence divergence of 15% in the G proteins; D) significant differences in genome organisation as evidenced by numbers and locations of ORFs; E) they can be distinguished in virus neutralisation tests; and F) they occupy different ecological niches as evidenced by differences in vertebrate hosts and or arthropod vectors.

Virus nameAccession numberVirus abbreviation
Longquan bat rhabdovirus 1OQ715712*LqBRV1
Wufeng shrew rhabdovirus 11OQ715732*WfSRV11
Wufeng shrew rhabdovirus 16OQ715706*WfSRV16
Wufeng shrew rhabdovirus 17OQ715721*WfSRV17

Virus names and virus abbreviations are not official ICTV designations.

* Coding region sequence incomplete