Resources: Papillomaviridae

Websites:

• The Papillomavirus Episteme (PaVE): http://pave.niaid.nih.gov (Van Doorslaer et al., 2013, Van Doorslaer et al., 2017a)
• The human papillomavirus reference center: http://www.hpvcenter.se
• The animal papillomavirus reference center: http://www.animalpv.org

Sequence alignments and tree files:

Figure 4. Papillomaviridae:

Concatenated E1, E2, L1, L2 alignment – for 53 isolates (one from each type species)

Tree file (newick format)

Alignment file (FASTA format)

Extended Figure 4. Papillomaviridae: 

Concatenated E1, E2, L1, L2 alignment for 343 isolates

Image (pdf format)

Tree file (tre format)

Alignment file (FASTA format)

Genera phylogenetic trees:

Figure 1. Alphapapillomavirus

Figure 1. Betapapillomavirus

Figure 1. Chipapillomavirus

Figure 1. Deltapapillomavirus

Figure 1. Dyokappapapillomavirus

Figure 1. Gammapapillomavirus

Figure 1. Lambdapapillomavirus

Figure 1. Mupapillomavirus

Figure 1. Psipapillomavirus

Figure 1. Taupapillomavirus

Figure 1. Upsilonpapillomavirus

Figure 1. Xipapillomavirus