References: Simuloviridae

 

Aiewsakun, P., E. M. Adriaenssens, R. Lavigne, A. M. Kropinski and P. Simmonds (2018). Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy. J Gen Virol 99: 1331-43. [PubMed]

Aiewsakun, P. and P. Simmonds (2018). The genomic underpinnings of eukaryotic virus taxonomy: creating a sequence-based framework for family-level virus classification. Microbiome 6: 38. [PubMed]

Cha, I. T., M. H. Lee, B. Y. Kim, Y. J. Cho, D. W. Kim, K. J. Yim, H. S. Song, M. J. Seo, J. K. Rhee, J. S. Choi, H. J. Choi, C. Yoon, S. W. Roh and Y. D. Nam (2015). Genome sequence of the haloarchaeon Haloterrigena jeotgali type strain A29(T) isolated from salt-fermented food. Stand Genomic Sci 10: 49. [PubMed]

Chen, B., Z. Chen, Y. Wang, H. Gong, L. Sima, J. Wang, S. Ouyang, W. Gan, M. Krupovic, X. Chen and S. Du (2020). ORF4 of the temperate archaeal virus SNJ1 governs the lysis-lysogeny switch and superinfection immunity. J Virol 94: e00841-20. [PubMed]

DasSarma, P., B. P. Anton, S. L. DasSarma, F. L. Martinez, D. Guzman, R. J. Roberts and S. DasSarma (2019). Genome sequences and methylation patterns of Natrinema versiforme BOL5-4 and Natrinema pallidum BOL6-1, two extremely halophilic archaea from a Bolivian salt mine. Microbiol Resour Announc 8. [PubMed]

De Colibus, L., E. Roine, T. S. Walter, S. L. Ilca, X. Wang, N. Wang, A. M. Roseman, D. Bamford, J. T. Huiskonen and D. I. Stuart (2019). Assembly of complex viruses exemplified by a halophilic euryarchaeal virus. Nat Commun 10: 1456. [PubMed]

Feng, J., B. Liu, Z. Zhang, Y. Ren, Y. Li, F. Gan, Y. Huang, X. Chen, P. Shen, L. Wang, B. Tang and X. F. Tang (2012). The complete genome sequence of Natrinema sp. J7-2, a haloarchaeon capable of growth on synthetic media without amino acid supplements. PLoS One 7: e41621. [PubMed]

Liu, Y., J. Wang, Y. Liu, Y. Wang, Z. Zhang, H. M. Oksanen, D. H. Bamford and X. Chen (2015). Identification and characterization of SNJ2, the first temperate pleolipovirus integrating into the genome of the SNJ1-lysogenic archaeal strain. Mol Microbiol 98: 1002-20. [PubMed]

Mei, Y., J. Chen, D. Sun, D. Chen, Y. Yang, P. Shen and X. Chen (2007). Induction and preliminary characterization of a novel halophage SNJ1 from lysogenic Natrinema sp. F5. Can J Microbiol 53: 1106-10. [PubMed]

Mei, Y., C. He, Y. Huang, Y. Liu, Z. Zhang, X. Chen and P. Shen (2015). Salinity regulation of the interaction of halovirus SNJ1 with its host and alteration of the halovirus replication strategy to adapt to the variable ecosystem. PLoS One 10: e0123874. [PubMed]

Rissanen, I., J. M. Grimes, A. Pawlowski, S. Mäntynen, K. Harlos, J. K. Bamford and D. I. Stuart (2013). Bacteriophage P23-77 capsid protein structures reveal the archetype of an ancient branch from a major virus lineage. Structure 21: 718-26. [PubMed]

Santos-Pérez, I., D. Charro, D. Gil-Carton, M. Azkargorta, F. Elortza, D. H. Bamford, H. M. Oksanen and N. G. A. Abrescia (2019). Structural basis for assembly of vertical single β-barrel viruses. Nat Commun 10: 1184. [PubMed]

Wang, Y., B. Chen, M. Cao, L. Sima, D. Prangishvili, X. Chen and M. Krupovic (2018). Rolling-circle replication initiation protein of haloarchaeal sphaerolipovirus SNJ1 is homologous to bacterial transposases of the IS91 family insertion sequences. J Gen Virol 99: 416-21. [PubMed]

Wang, Y., L. Sima, J. Lv, S. Huang, Y. Liu, J. Wang, M. Krupovic and X. Chen (2016). Identification, characterization, and application of the replicon region of the halophilic temperate sphaerolipovirus SNJ1. J Bacteriol 198: 1952-64. [PubMed]

Ye, X., J. Ou, L. Ni, W. Shi and P. Shen (2003). Characterization of a novel plasmid from extremely halophilic Archaea: nucleotide sequence and function analysis. FEMS Microbiol Lett 221: 53-7. [PubMed]

Zhang, Z., Y. Liu, S. Wang, D. Yang, Y. Cheng, J. Hu, J. Chen, Y. Mei, P. Shen, D. H. Bamford and X. Chen (2012). Temperate membrane-containing halophilic archaeal virus SNJ1 has a circular dsDNA genome identical to that of plasmid pHH205. Virology 434: 233-41. [PubMed]