References: Cystoviridae


Bamford, D. H., Palva, E. T. & Lounatmaa, K. (1976).  Ultrastructure and life cycle of the lipid-containing bacteriophage φ6. J Gen Virol 32, 249-259. [PubMed]

Bamford, D. H., Romantschuk, M. & Somerharju, P. J. (1987).  Membrane fusion in prokaryotes: bacteriophage φ6 membrane fuses with the Pseudomonas syringae outer membrane. Embo j 6, 1467-1473. [PubMed]

Butcher, S. J., Dokland, T., Ojala, P. M., Bamford, D. H. & Fuller, S. D. (1997).  Intermediates in the assembly pathway of the double-stranded RNA virus φ6. Embo j 16, 4477-4487. [PubMed]

Butcher, S. J., Grimes, J. M., Makeyev, E. V., Bamford, D. H. & Stuart, D. I. (2001).  A mechanism for initiating RNA-dependent RNA polymerization. Nature 410, 235-240. [PubMed]

Coplin, D. L., Van Etten, J. L., Koski, R. K. & Vidaver, A. K. (1975).  Intermediates in the biosynthesis of double-stranded ribonucleic acids of bacteriophage φ6. Proceedings of the National Academy of Sciences, USA 72, 849-853. [PubMed]

Dessau, M., Goldhill, D., McBride, R., Turner, P. E. & Modis, Y. (2012).  Selective pressure causes an RNA virus to trade reproductive fitness for increased structural and thermal stability of a viral enzyme. PLoS Genet 8, e1003102. [PubMed]

Emori, Y., Iba, H. & Okada, Y. (1983).  Transcriptional regulation of three double-stranded RNA segments of bacteriophage φ6 in vitro. J Virol 46, 196-203. [PubMed]

Frilander, M. & Bamford, D. H. (1995).  In vitro packaging of the single-stranded RNA genomic precursors of the segmented double-stranded RNA bacteriophage φ6: the three segments modulate each other's packaging efficiency. J Mol Biol 246, 418-428. [PubMed]

Gottlieb, P., Metzger, S., Romantschuk, M., Carton, J., Strassman, J., Bamford, D. H., Kalkkinen, N. & Mindich, L. (1988a).  Nucleotide sequence of the middle dsRNA segment of bacteriophage φ6: placement of the genes of membrane-associated proteins. Virology 163, 183-190. [PubMed]

Gottlieb, P., Strassman, J., Bamford, D. H. & Mindich, L. (1988b).  Production of a polyhedral particle in Escherichia coli from a cDNA copy of the large genomic segment of bacteriophage φ6. J Virol 62, 181-187. [PubMed]

Hoogstraten, D., Qiao, X., Sun, Y., Hu, A., Onodera, S. & Mindich, L. (2000).  Characterization of φ8, a bacteriophage containing three double-stranded RNA genomic segments and distantly related to φ6. Virology 272, 218-224. [PubMed]

Huiskonen, J. T., de Haas, F., Bubeck, D., Bamford, D. H., Fuller, S. D. & Butcher, S. J. (2006).  Structure of the bacteriophage φ6 nucleocapsid suggests a mechanism for sequential RNA packaging. Structure 14, 1039-1048. [PubMed]

Ilca, S. L., Kotecha, A., Sun, X., Poranen, M. M., Stuart, D. I. & Huiskonen, J. T. (2015).  Localized reconstruction of subunits from electron cryomicroscopy images of macromolecular complexes. Nat Commun 6, 8843. [PubMed]

Ilca, S. L., Sun, X., El Omari, K., Kotecha, A., de Haas, F., DiMaio, F., Grimes, J. M., Stuart, D. I., Poranen, M. M. & Huiskonen, J. T. (2019).  Multiple liquid crystalline geometries of highly compacted nucleic acid in a dsRNA virus. Nature 570, 252-256. [PubMed]

Jäälinoja, H. T., Huiskonen, J. T. & Butcher, S. J. (2007).  Electron cryomicroscopy comparison of the architectures of the enveloped bacteriophages phi6 and phi8. Structure 15, 157-167. [PubMed]

Johnson, M. D., 3rd & Mindich, L. (1994).  Plasmid-directed assembly of the lipid-containing membrane of bacteriophage φ6. J Bacteriol 176, 4124-4132. [PubMed]

Laurinavičius, S., Bamford, D. H. & Somerharju, P. (2007).  Transbilayer distribution of phospholipids in bacteriophage membranes. Biochim Biophys Acta 1768, 2568-2577. [PubMed]

Makeyev, E. V. & Bamford, D. H. (2000).  Replicase activity of purified recombinant protein P2 of double-stranded RNA bacteriophage φ6. Embo j 19, 124-133. [PubMed]

McGraw, T., Mindich, L. & Frangione, B. (1986).  Nucleotide sequence of the small double-stranded RNA segment of bacteriophage φ6: novel mechanism of natural translational control. J Virol 58, 142-151. [PubMed]

Mertens, P. (2004).  The dsRNA viruses. Virus Research 101, 3-13. [PubMed]

Mindich, L. & Lehman, J. (1979).  Cell wall lysin as a component of the bacteriophage φ6 virion. J Virol 30, 489-496. [PubMed]

Mindich, L., Nemhauser, I., Gottlieb, P., Romantschuk, M., Carton, J., Frucht, S., Strassman, J., Bamford, D. H. & Kalkkinen, N. (1988).  Nucleotide sequence of the large double-stranded RNA segment of bacteriophage φ6: genes specifying the viral replicase and transcriptase. J Virol 62, 1180-1185. [PubMed]

Mindich, L., Qiao, X., Qiao, J., Onodera, S., Romantschuk, M. & Hoogstraten, D. (1999).  Isolation of additional bacteriophages with genomes of segmented double-stranded RNA. J Bacteriol 181, 4505-4508. [PubMed]

Nemecek, D., Cheng, N., Qiao, J., Mindich, L., Steven, A. C. & Heymann, J. B. (2011).  Stepwise expansion of the bacteriophage φ6 procapsid: possible packaging intermediates. J Mol Biol 414, 260-271. [PubMed]

Olkkonen, V. M. & Bamford, D. H. (1987).  The nucleocapsid of the lipid-containing double-stranded RNA bacteriophage phi 6 contains a protein skeleton consisting of a single polypeptide species. J Virol 61, 2362-2367. [PubMed]

Olkkonen, V. M., Ojala, P. M. & Bamford, D. H. (1991).  Generation of infectious nucleocapsids by in vitro assembly of the shell protein on to the polymerase complex of the dsRNA bacteriophage φ6. J Mol Biol 218, 569-581. [PubMed]

Pirttimaa, M. J., Paatero, A. O., Frilander, M. J. & Bamford, D. H. (2002).  Nonspecific nucleoside triphosphatase P4 of double-stranded RNA bacteriophage φ6 is required for single-stranded RNA packaging and transcription. J Virol 76, 10122-10127. [PubMed]

Poranen, M. M. & Bamford, D. H. (2012).  Assembly of large icosahedral double-stranded RNA viruses. Adv Exp Med Biol 726, 379-402. [PubMed]

Poranen, M. M., Daugelavičius, R., Ojala, P. M., Hess, M. W. & Bamford, D. H. (1999).  A novel virus-host cell membrane interaction. Membrane voltage-dependent endocytic-like entry of bacteriophage φ6 nucleocapsid. J Cell Biol 147, 671-682. [PubMed]

Poranen, M. M., Paatero, A. O., Tuma, R. & Bamford, D. H. (2001).  Self-assembly of a viral molecular machine from purified protein and RNA constituents. Mol Cell 7, 845-854. [PubMed]

Roine, E., Raineri, D. M., Romantschuk, M., Wilson, M. & Nunn, D. N. (1998).  Characterization of type IV pilus genes in Pseudomonas syringae pv. tomato DC3000. Mol Plant Microbe Interact 11, 1048-1056. [PubMed]

Sinclair, J. F., Tzagoloff, A., Levine, D. & Mindich, L. (1975).  Proteins of bacteriophage φ6. J Virol 16, 685-695. [PubMed]

Sun, X., Pirttimaa, M. J., Bamford, D. H. & Poranen, M. M. (2013).  Rescue of maturation off-pathway products in the assembly of Pseudomonas phage φ6. J Virol 87, 13279-13286. [PubMed]

Sun, Z., El Omari, K., Sun, X., Ilca, S. L., Kotecha, A., Stuart, D. I., Poranen, M. M. & Huiskonen, J. T. (2017).  Double-stranded RNA virus outer shell assembly by bona fide domain-swapping. Nature Communications 8, 14814. [PubMed]

Usala, S. J., Brownstein, B. H. & Haselkorn, R. (1980).  Displacement of parental RNA strands during in vitro transcription by bacteriophage φ6 nucleocapsids. Cell 19, 855-862. [PubMed]

Van Etten, J. L., Burbank, D. E., Cuppels, D. A., Lane, L. C. & Vidaver, A. K. (1980).  Semiconservative synthesis of single-stranded RNA by bacteriophage phi 6 RNA polymerase. J Virol 33, 769-773. [PubMed]