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Paslahepevirus balayani (HEV) Sequences and Alignments
Paslahepevirus balayani (HEV) Sequences and Alignments
Datasets used to assist in the classification of HEV isolates
- HEV_HVR_subtypes_Dec_2023.txt
- December 2023 FASTA alignment of Paslahepevirus balayani subtype nucleotide sequences including the (unaligned) hypervariable region.
- HEV_reference_seqs_May_2020.fst; HEV_reference_seqs_May_2020.SSE
- FASTA and SSE alignments of HEV reference sequences.
- Orthoehepvirus_sse.SSE
- SSE format of amino acid alignment of concatenated ORF 1 and ORF2 of Orthohepevirus species A, B, C and D and moose HEV. No attempt has been made to align hypervariable regions. Alignment generated in SSE using Muscle.
- Orthohepevirus_fasta.FST
- FASTA format of amino acid alignment of concatenated ORF 1 and ORF2 of Orthohepevirus species A, B, C and D and moose HEV. No attempt has been made to align hypervariable regions. Alignment generated in SSE using Muscle.